Base by Base
Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, making open-access science faster to share and easier to explore.

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Jaksot(462)

190: dGCNA and single-cell maps reveal cell-type mechanisms in T2D

190: dGCNA and single-cell maps reveal cell-type mechanisms in T2D

Martínez‑López JA et al et al., Nature Communications - This episode examines a Nature Communications study that introduces differential Gene Coordination Network Analysis (dGCNA) applied to deep Smar...

6 Marras 202515min

189: DNA methylation patterns facilitate tracing the origin of neuroendocrine neoplasms

189: DNA methylation patterns facilitate tracing the origin of neuroendocrine neoplasms

️ Episode 189: DNA methylation patterns facilitate tracing the origin of neuroendocrine neoplasms In this episode of PaperCast Base by Base, we explore how genome-wide DNA methylation profiling can p...

5 Marras 202514min

188: Proteomics + Machine Learning for Lyme Neuroborreliosis Diagnosis

188: Proteomics + Machine Learning for Lyme Neuroborreliosis Diagnosis

️ Episode 188: Proteomics + Machine Learning for Lyme Neuroborreliosis Diagnosis In this episode of PaperCast Base by Base, we explore how large‑scale mass‑spectrometry proteomics of cerebrospinal fl...

4 Marras 202516min

187: Gapped scheduling: CRLX101 + olaparib Phase I trial

187: Gapped scheduling: CRLX101 + olaparib Phase I trial

Nature Communications (2025) 16:9457 et al., Nature Communications - Phase I dose-escalation trial combining CRLX101 (nanoparticle camptothecin) with olaparib using a 48-hour gapped schedule in 24 pat...

3 Marras 202516min

186: TNFα–TGFβ Axis Disrupts Nasal Epithelium in Post‑COVID Syndrome

186: TNFα–TGFβ Axis Disrupts Nasal Epithelium in Post‑COVID Syndrome

️ Episode 186: TNFα–TGFβ Axis Disrupts Nasal Epithelium in Post‑COVID Syndrome In this episode of PaperCast Base by Base, we explore a single‑cell RNA‑seq study of nasal biopsies showing that persist...

2 Marras 202515min

185: Altered Milk Tryptophan in Women Living with HIV

185: Altered Milk Tryptophan in Women Living with HIV

️ Episode 185: Altered Milk Tryptophan in Women Living with HIV In this episode of PaperCast Base by Base, we explore a longitudinal metabolomics study of human milk that reveals how maternal HIV inf...

1 Marras 202514min

184: High-Accuracy Multiethnic XGBoost for Skin Cancer Identification

184: High-Accuracy Multiethnic XGBoost for Skin Cancer Identification

️ Episode 184: High-Accuracy Multiethnic XGBoost for Skin Cancer Identification In this episode of PaperCast Base by Base, we explore a large-scale study that builds a risk factor–based XGBoost model...

31 Loka 202517min

183: The Genetic Lottery Goes to School: Better Schools Compensate for Genetic Differences

183: The Genetic Lottery Goes to School: Better Schools Compensate for Genetic Differences

️ Episode 183: The Genetic Lottery Goes to School: Better Schools Compensate for Genetic Differences In this episode of PaperCast Base by Base, we explore a large causal study from Norway asking whet...

30 Loka 202518min

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