206: Wild Birds and the North American H5N1 Epizootic
Base by Base22 Nov 2025

206: Wild Birds and the North American H5N1 Epizootic

Wild Birds and the North American H5N1 Epizootic

Music:
Enjoy the music based on this article at the end of the episode.

License:
This episode is based on an open-access article published under the Creative Commons Attribution 4.0 International License (CC BY 4.0) – https://creativecommons.org/licenses/by/4.0/

Support:
Base by Base – Stripe donations: https://donate.stripe.com/7sY4gz71B2sN3RWac5gEg00

Official website https://basebybase.com

On PaperCast Base by Base you’ll discover the latest in genomics, functional genomics, structural genomics, and proteomics.

Episode link: https://basebybase.com/episodes/wild-birds-and-the-north-american-h5n1-epizootic

️ Episode:
206: Wild Birds and the North American H5N1 Epizootic

️ Season:
1

Article title:
Ecology and spread of the North American H5N1 epizootic

Journal:
Nature

DOI:
10.1038/s41586-025-09737-x

QC:
This episode was checked against the original article PDF and publication metadata for the episode release published on 2025-11-22.

QC Scope:
- article metadata and core scientific claims from the narration
- excludes analogies, intro/outro, and music
- transcript coverage: Audited substantive narrative segments: introduction to North American H5N1 epizootic, phylogeographic analysis and introductions, flyway diffusion, canonical vs non-canonical hosts, backyard vs commercial spillovers, and surveillance/limitations.
- transcript topics: Introduction and scope of North American H5N1 epizootic; Phylogeographic analysis and number of introductions; Flyway diffusion across Atlantic, Mississippi, Central, and Pacific; Canonical hosts (Anseriformes) vs non-canonical hosts; Persistence times in wild vs domestic birds; Spillovers to backyard/commercial birds and their implications

QC Summary:
- factual score: 10/10
- metadata score: 10/10
- supported core claims: 6
- claims flagged for review: 0
- metadata checks passed: 4
- metadata issues found: 0

Metadata Audited:
- article_doi
- article_title
- article_journal
- license

Factual Items Audited:
- Nine introductions into North America from Europe/Asia
- Anseriformes drive transmission; non-canonical hosts are largely dead-ends
- 46–113 independent introductions into domestic birds from wild birds
- Backyard birds infected about 9.6 days earlier than commercial poultry
- Farm-to-farm transmission is a minor component; wild-bird introductions drive spillovers
- Wild birds are the main engine; enhanced wild-bird surveillance is key

QC result: Pass.

Chapters
  • (00:00:00) - North American bird flu: The genetics of the virus
  • (00:04:03) - The map of bird flu spreads
  • (00:06:07) - How Did the Zika virus get to North America?
  • (00:09:09) - H5N1 spillover into poultry operations
  • (00:14:07) - Signals on the Flyways

Det här avsnittet är hämtat från ett öppet RSS-flöde och publiceras inte av Podme. Det kan innehålla reklam.

Avsnitt(445)

444: Many-eyes or Sentinels? How Cost Curvature Shapes Collective Vigilance

444: Many-eyes or Sentinels? How Cost Curvature Shapes Collective Vigilance

Pilgrim C et al., PNAS - A minimal analytical model shows that whether animal groups adopt distributed low-level vigilance (many-eyes) or concentrated high-vigilance roles (sentinels) depends on how i...

19 Aug 24min

443: 5D‑ASO boosts exon 51 skipping and restores dystrophin in DMD models

443: 5D‑ASO boosts exon 51 skipping and restores dystrophin in DMD models

Feng P et al., PNAS - This paper describes a bipartite antisense oligonucleotide (5D‑ASO) design that appends a short 5′ splice site decoy tail to improve exon skipping, demonstrating robust efficacy ...

18 Aug 19min

442: When pumps go missing: Ca2+ control of PMCA2 in Tmc1 deafness mutants

442: When pumps go missing: Ca2+ control of PMCA2 in Tmc1 deafness mutants

Rolseth AB et al., Proceedings of the National Academy of Sciences (PNAS) - This study links reduced Ca2+ entry through mutant TMC1 mechanotransducer channels to decreased PMCA2 pump density in outer ...

17 Aug 22min

441: Evolutionary mapping of Cav1.3 functional sites

441: Evolutionary mapping of Cav1.3 functional sites

Tang X et al., PNAS - The authors apply an evolutionary sequence-covariation model to the Cav1.3 (CACNA1D) α1-subunit, map predicted pathogenicity onto structural models, and validate five predicted s...

14 Aug 24min

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

Lamkina EN et al., PNAS - This episode reviews a PNAS brief report showing that DENV-4 infection induces marked DNA damage in infected cells while broadly suppressing transcription of DNA repair pathw...

12 Aug 23min

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

Longo LM et al., PNAS - This episode summarizes a PNAS study introducing CLSS, a contrastive two-tower protein language model that coembeds domain sequences, structures, and subsequences into a shared...

11 Aug 23min

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

Axakova A et al., The American Journal of Human Genetics - Axakova et al. generated a variant effect map for AIRE using an insulin‑promoter GFP reporter in HEK293 cells to measure the functional impac...

10 Aug 24min

437: Cell villages and Dirichlet modeling map human cell fitness genetics

437: Cell villages and Dirichlet modeling map human cell fitness genetics

Hanson C et al., The American Journal of Human Genetics - Hanson et al. combine pooled multi-donor human neural progenitor cell "villages" with Townlet, a hierarchical Dirichlet regression model, to e...

9 Aug 28min

Populärt inom Vetenskap

dumma-manniskor
p3-dystopia
allt-du-velat-veta
hacka-livet
rss-vetenskapsradion
ufo-sverige
svd-nyhetsartiklar
bildningspodden
rss-vetenskapsradion-2
halsorevolutionen
rss-spraket
medicinvetarna
sexet
barnpsykologerna
vetenskapsradion
det-morka-psyket
paranormalt-med-caroline-giertz
rss-ufobortom-rimligt-tvivel
ufo-sverige-2
rss-kriminologerna