277: MDGA2 homozygous loss-of-function variants in developmental and epileptic encephalopathy

277: MDGA2 homozygous loss-of-function variants in developmental and epileptic encephalopathy

Morsy H et al., The American Journal of Human Genetics, Corrected proof. doi:10.1016/j.ajhg.2025.12.015 - Exome sequencing identifies homozygous MDGA2 loss-of-function variants in nine individuals and functional neuronal assays show impaired MDGA2 trafficking with disrupted Nlgn1-dependent excitatory synapse regulation causing DEE. Key terms: MDGA2, developmental and epileptic encephalopathy, loss-of-function, neuroligin-1, exome sequencing.

Study Highlights:
Exome sequencing of consanguineous families identified seven distinct homozygous MDGA2 loss-of-function variants in nine individuals with severe developmental and epileptic encephalopathy. Functional evaluation used mammalian expression in HEK293T cells, heterologous synapse-formation assays, cultured hippocampal neurons, and electrophysiology. Representative nonsense variants abolished MDGA2 surface trafficking, disrupted MDGA2–Nlgn1 binding, failed to suppress excitatory synapse density, and did not reduce AMPAR- and NMDAR-mediated synaptic responses. These synaptic deficits imply disruption of excitatory-inhibitory balance, providing a mechanistic link to early-onset intractable seizures and progressive neurodevelopmental impairment.

Conclusion:
Homozygous MDGA2 loss-of-function variants cause an autosomal-recessive developmental and epileptic encephalopathy by impairing MDGA2 trafficking and Nlgn1-dependent suppression of excitatory synapses.

Music:
Enjoy the music based on this article at the end of the episode.

Article title:
MDGA2 homozygous loss-of-function variants cause developmental and epileptic encephalopathy

First author:
Morsy H

Journal:
The American Journal of Human Genetics, Corrected proof. doi:10.1016/j.ajhg.2025.12.015

DOI:
10.1016/j.ajhg.2025.12.015

Reference:
Morsy H, Kim H, Jang G, et al. MDGA2 homozygous loss-of-function variants cause developmental and epileptic encephalopathy. The American Journal of Human Genetics. 2026;113:1–12. https://doi.org/10.1016/j.ajhg.2025.12.015

License:
This episode is based on an open-access article published under the Creative Commons Attribution 4.0 International License (CC BY 4.0) - https://creativecommons.org/licenses/by/4.0/

Support:
Base by Base – Stripe donations: https://donate.stripe.com/7sY4gz71B2sN3RWac5gEg00

Official website https://basebybase.com

On PaperCast Base by Base you’ll discover the latest in genomics, functional genomics, structural genomics, and proteomics.

Episode link: https://basebybase.com/episodes/mdga2-loss-of-function-dee

QC:
This episode was checked against the original article PDF and publication metadata for the episode release published on 2026-02-01.

QC Scope:
- article metadata and core scientific claims from the narration
- excludes analogies, intro/outro, and music
- transcript coverage: Audit covered the sections describing MDGA2 function in synaptic regulation, genetic basis (LoF variants in consanguineous families), functional assays (trafficking, Nlgn1 interactions, synapse formation, electrophysiology), clinical phenotype (DEE with seizures), and therapeutic angles (ketogenic diet, potential recep
- transcript topics: MDGA2 as a brake on Nlgn1 and suppression of excitatory synapses; Genetic basis: homozygous loss-of-function MDGA2 variants in consanguineous families; Functional validation: trafficking and surface expression of MDGA2; Nlgn1 interaction; Synapse formation and electrophysiology: mEPSCs, AMPAR/NMDAR EPSCs; Clinical presentation: DEE phenotype, hypotonia, seizures, dysmorphic features, MRI findings; Therapeutic angles: ketogenic diet effects; potential TRKB/AMPA receptor–related targets

QC Summary:
- factual score: 10/10
- metadata score: 10/10
- supported core claims: 6
- claims flagged for review: 0
- metadata checks passed: 4
-...

Det här avsnittet är hämtat från ett öppet RSS-flöde och publiceras inte av Podme. Det kan innehålla reklam.

Avsnitt(445)

444: Many-eyes or Sentinels? How Cost Curvature Shapes Collective Vigilance

444: Many-eyes or Sentinels? How Cost Curvature Shapes Collective Vigilance

Pilgrim C et al., PNAS - A minimal analytical model shows that whether animal groups adopt distributed low-level vigilance (many-eyes) or concentrated high-vigilance roles (sentinels) depends on how i...

19 Aug 24min

443: 5D‑ASO boosts exon 51 skipping and restores dystrophin in DMD models

443: 5D‑ASO boosts exon 51 skipping and restores dystrophin in DMD models

Feng P et al., PNAS - This paper describes a bipartite antisense oligonucleotide (5D‑ASO) design that appends a short 5′ splice site decoy tail to improve exon skipping, demonstrating robust efficacy ...

18 Aug 19min

442: When pumps go missing: Ca2+ control of PMCA2 in Tmc1 deafness mutants

442: When pumps go missing: Ca2+ control of PMCA2 in Tmc1 deafness mutants

Rolseth AB et al., Proceedings of the National Academy of Sciences (PNAS) - This study links reduced Ca2+ entry through mutant TMC1 mechanotransducer channels to decreased PMCA2 pump density in outer ...

17 Aug 22min

441: Evolutionary mapping of Cav1.3 functional sites

441: Evolutionary mapping of Cav1.3 functional sites

Tang X et al., PNAS - The authors apply an evolutionary sequence-covariation model to the Cav1.3 (CACNA1D) α1-subunit, map predicted pathogenicity onto structural models, and validate five predicted s...

14 Aug 24min

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

Lamkina EN et al., PNAS - This episode reviews a PNAS brief report showing that DENV-4 infection induces marked DNA damage in infected cells while broadly suppressing transcription of DNA repair pathw...

12 Aug 23min

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

Longo LM et al., PNAS - This episode summarizes a PNAS study introducing CLSS, a contrastive two-tower protein language model that coembeds domain sequences, structures, and subsequences into a shared...

11 Aug 23min

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

Axakova A et al., The American Journal of Human Genetics - Axakova et al. generated a variant effect map for AIRE using an insulin‑promoter GFP reporter in HEK293 cells to measure the functional impac...

10 Aug 24min

437: Cell villages and Dirichlet modeling map human cell fitness genetics

437: Cell villages and Dirichlet modeling map human cell fitness genetics

Hanson C et al., The American Journal of Human Genetics - Hanson et al. combine pooled multi-donor human neural progenitor cell "villages" with Townlet, a hierarchical Dirichlet regression model, to e...

9 Aug 28min

Populärt inom Vetenskap

dumma-manniskor
p3-dystopia
allt-du-velat-veta
hacka-livet
rss-vetenskapsradion
ufo-sverige
svd-nyhetsartiklar
bildningspodden
rss-vetenskapsradion-2
halsorevolutionen
rss-spraket
medicinvetarna
sexet
barnpsykologerna
vetenskapsradion
det-morka-psyket
paranormalt-med-caroline-giertz
rss-ufobortom-rimligt-tvivel
ufo-sverige-2
rss-kriminologerna