82: JAK2 inhibition drives RAS clonal selection in myelofibrosis
Base by Base21 Jul 2025

82: JAK2 inhibition drives RAS clonal selection in myelofibrosis

Maslah N et al., Nature Communications - Translational study showing ruxolitinib and JAK2 suppression select for RAS pathway–mutant clones in myelofibrosis, enhancing their fitness via MAPK activation and linking this selection to worse clinical outcomes in treated patients. Key terms: ruxolitinib, JAK2, RAS mutations, myelofibrosis, clonal evolution.

Study Highlights:
Longitudinal NGS of 143 myelofibrosis patients and targeted analyses show ruxolitinib exposure is associated with accumulation and increased VAF of NRAS/KRAS/CBL mutations compared with non-exposed patients. Single-cell DNA sequencing and ex vivo CD34+ assays demonstrate ruxolitinib selects RAS-mutant clones both inside and outside JAK/STAT-activated driver clones. In vitro and in vivo competition models and Jak2 knockdown reveal JAK2 inhibition increases RAS-mutant cellular fitness via MAPK pathway activation and release from oncogene-induced senescence. Clinically, RAS pathway mutations predict worse transformation-free and overall survival only in ruxolitinib-treated patients.

Conclusion:
JAK2 inhibition can promote selection and expansion of RAS-mutant clones in MPNs through MAPK-driven fitness advantages, supporting RAS screening and consideration of combinatorial strategies when using JAK inhibitors.

Music:
Enjoy the music based on this article at the end of the episode.

Article title:
JAK2 inhibition mediates clonal selection of RAS pathway mutations in myeloproliferative neoplasms

First author:
Maslah N

Journal:
Nature Communications

DOI:
10.1038/s41467-025-60884-1

Reference:
Maslah N, Kaci N, Roux B, et al. JAK2 inhibition mediates clonal selection of RAS pathway mutations in myeloproliferative neoplasms. Nat Commun. 2025;16:6270. doi:10.1038/s41467-025-60884-1

License:
This episode is based on an open-access article published under the Creative Commons Attribution 4.0 International License (CC BY 4.0) – https://creativecommons.org/licenses/by/4.0/

Support:
Base by Base – Stripe donations: https://donate.stripe.com/7sY4gz71B2sN3RWac5gEg00

Official website https://basebybase.com

On PaperCast Base by Base you'll discover the latest in genomics, functional genomics, structural genomics, and proteomics.

Episode link: https://basebybase.com/episodes/ep82-jak2-inhibition-ras-selection-mpn

QC:
This episode was checked against the original article PDF and publication metadata for the episode release published on 2025-07-21.

QC Scope:
- article metadata and core scientific claims from the narration
- excludes analogies, intro/outro, and music
- transcript coverage: Audited transcript sections covering JAK2 inhibition, Ras/MAPK clonal selection, single-cell sequencing and ex vivo CD34+ cell data, in vivo murine competition models, clinical outcome associations, and therapeutic implications.
- transcript topics: JAK-STAT signaling and JAK inhibitors; RAS pathway mutations and clonal selection (NRAS/KRAS/CBL); Single-cell sequencing and ex vivo CD34+ cell experiments; In vivo murine bone marrow competition and transplantation models; MAPK activation and rescue from oncogene-induced senescence; Clinical outcomes: transformation-free survival and overall survival

QC Summary:
- factual score: 10/10
- metadata score: 10/10
- supported core claims: 6
- claims flagged for review: 0
- metadata checks passed: 4
- metadata issues found: 0

Metadata Audited:
- article_doi
- article_title
- article_journal
- license

Factual Items Audited:
- Ruxolitinib exposure is associated with accumulation/selection of RAS pathway mutations (NRAS, KRAS, CBL) in myelofibrosis patients.
- RAS mutations predict worse transformation-free survival and overall survival primarily in the context of ruxolitinib treatment.

Denne episoden er hentet fra en åpen RSS-feed og er ikke publisert av Podme. Den kan derfor inneholde annonser.

Episoder(444)

441: Evolutionary mapping of Cav1.3 functional sites

441: Evolutionary mapping of Cav1.3 functional sites

Tang X et al., PNAS - The authors apply an evolutionary sequence-covariation model to the Cav1.3 (CACNA1D) α1-subunit, map predicted pathogenicity onto structural models, and validate five predicted s...

14 Aug 24min

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

Lamkina EN et al., PNAS - This episode reviews a PNAS brief report showing that DENV-4 infection induces marked DNA damage in infected cells while broadly suppressing transcription of DNA repair pathw...

12 Aug 23min

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

Lamkina EN et al., PNAS - This episode reviews a PNAS brief report showing that DENV-4 infection induces marked DNA damage in infected cells while broadly suppressing transcription of DNA repair pathw...

12 Aug 23min

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

Longo LM et al., PNAS - This episode summarizes a PNAS study introducing CLSS, a contrastive two-tower protein language model that coembeds domain sequences, structures, and subsequences into a shared...

11 Aug 23min

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

Axakova A et al., The American Journal of Human Genetics - Axakova et al. generated a variant effect map for AIRE using an insulin‑promoter GFP reporter in HEK293 cells to measure the functional impac...

10 Aug 24min

437: Cell villages and Dirichlet modeling map human cell fitness genetics

437: Cell villages and Dirichlet modeling map human cell fitness genetics

Hanson C et al., The American Journal of Human Genetics - Hanson et al. combine pooled multi-donor human neural progenitor cell "villages" with Townlet, a hierarchical Dirichlet regression model, to e...

9 Aug 28min

436: KIAP4 and the ARND family: building the Leishmania adhesion plaque

436: KIAP4 and the ARND family: building the Leishmania adhesion plaque

Owino BO et al., PNAS - Using TurboID proximity proteomics and microscopy, researchers identify KIAP4 as the canonical member of a conserved Adhesion Related NTPase-like Domain (ARND) family that loca...

8 Aug 24min

435: E. coli TGT binds two tRNAs — cryo-EM reveals dual engagement

435: E. coli TGT binds two tRNAs — cryo-EM reveals dual engagement

Ember M et al., PNAS - This episode examines a cryo-EM study of Escherichia coli tRNA-guanine transglycosylase (TGT) that solves the enzyme structure and its covalent intermediate with tRNATyr. Unexpe...

7 Aug 19min

Populært innen Vitenskap

fastlegen
tingenes-tilstand
romkapsel
jss
liberal-halvtime
rekommandert
villmarksliv
abels-tarn
dekodet-2
vett-og-vitenskap-med-gaute-einevoll
sinnsyn
fjellsportpodden
rss-overskuddsliv
rss-rekommandert
tomprat-med-gunnar-tjomlid
rss-inn-til-kjernen-med-sunniva-rose
hva-er-greia-med
rss-nysgjerrige-norge
diagnose
kvinnehelsepodden