265: ANTSR lncRNA and the conserved multiallelic sex-determining locus across Aculeata

265: ANTSR lncRNA and the conserved multiallelic sex-determining locus across Aculeata

Yu C et al., Proc. Natl. Acad. Sci. U.S.A. 2026.123:e2522417123 - Genetic mapping and comparative genomics show the lncRNA ANTSR multiallelic locus in Aculeata directs female development via heterozygosity despite lacking sequence homology. Key terms: ANTSR, Aculeata, lncRNA, complementary sex determination, heterozygosity.

Study Highlights:
The study analyzed 41 hymenopteran genomes and performed whole-genome resequencing and genetic mapping in Bombus terrestris and Vespa velutina nigrithorax to locate the sex-determining region. The ANTSR locus is a multiallelic noncoding interval between CRELD2 and THUMPD3 that is highly polymorphic and heterozygous in females but homozygous in diploid males across ants, bumblebees, and hornets. Comparative synteny shows the CRELD2–THUMPD3 block originated ~160–200 Mya and the locus has functioned as a zygosity-based female determinant for over 150 million years. Despite this deep functional conservation, alignments and phastCons analyses reveal no detectable sequence homology among distant aculeate lineages, and heterozygosity at ANTSR provides an actionable molecular sex marker for breeding and conservation.

Conclusion:
The ANTSR multiallelic noncoding locus is an ancient, positionally conserved zygosity-based sex determinant across Aculeata that has retained function for over 150 million years despite complete sequence divergence.

Music:
Enjoy the music based on this article at the end of the episode.

Article title:
Deep evolutionary conservation of a sex-determining locus without sequence homology

First author:
Yu C

Journal:
Proc. Natl. Acad. Sci. U.S.A. 2026.123:e2522417123

DOI:
10.1073/pnas.2522417123

Reference:
Yu C, Moog S, Pan Q, Keller Valsecchi CI, Dupont S, Darrouzet E, Darras H, Hodapp D, Colgan TJ, et al. Deep evolutionary conservation of a sex-determining locus without sequence homology. Proc. Natl. Acad. Sci. U.S.A. 2026;123:e2522417123. https://doi.org/10.1073/pnas.2522417123

License:
This episode is based on an open-access article published under the Creative Commons Attribution 4.0 International License (CC BY 4.0) - https://creativecommons.org/licenses/by/4.0/

Support:
Base by Base – Stripe donations: https://donate.stripe.com/7sY4gz71B2sN3RWac5gEg00

Official website https://basebybase.com

On PaperCast Base by Base you’ll discover the latest in genomics, functional genomics, structural genomics, and proteomics.

Episode link: https://basebybase.com/episodes/antsr-aculeata-sex-locus

QC:
This episode was checked against the original article PDF and publication metadata for the episode release published on 2026-01-20.

QC Scope:
- article metadata and core scientific claims from the narration
- excludes analogies, intro/outro, and music
- transcript coverage: Substantive audit of the transcript sections describing: (1) haplodiploid sex determination in Hymenoptera; (2) ANTSR locus and its position between CRELD2 and THUMPD3; (3) heterozygosity-dependent female development demonstrated in Bombus terrestris and Vespa velutina; (4) ANTSR as a long noncoding RNA; (5) absence of
- transcript topics: haplodiploid sex determination in Hymenoptera; ANTSR locus and CRELD2–THUMPD3 synteny; heterozygosity-based female determination at ANTSR; Bombus terrestris: lab crosses and diploid male production; Vespa velutina nigrithorax: field data and haplotype diversity; ANTSR as a long noncoding RNA

QC Summary:
- factual score: 10/10
- metadata score: 10/10
- supported core claims: 8
- claims flagged for review: 0
- metadata checks passed: 4
- metadata issues found: 0

Metadata Audited:
- article_doi
- article_title
- article_journal
- license

Factual Items Audited:
- ANTSR locus is a multiallelic noncoding region that determi...

Denne episoden er hentet fra en åpen RSS-feed og er ikke publisert av Podme. Den kan derfor inneholde annonser.

Episoder(444)

441: Evolutionary mapping of Cav1.3 functional sites

441: Evolutionary mapping of Cav1.3 functional sites

Tang X et al., PNAS - The authors apply an evolutionary sequence-covariation model to the Cav1.3 (CACNA1D) α1-subunit, map predicted pathogenicity onto structural models, and validate five predicted s...

14 Aug 24min

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

Lamkina EN et al., PNAS - This episode reviews a PNAS brief report showing that DENV-4 infection induces marked DNA damage in infected cells while broadly suppressing transcription of DNA repair pathw...

12 Aug 23min

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

440: DENV-4: Suppressing DNA Repair and Causing Genome Damage

Lamkina EN et al., PNAS - This episode reviews a PNAS brief report showing that DENV-4 infection induces marked DNA damage in infected cells while broadly suppressing transcription of DNA repair pathw...

12 Aug 23min

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

439: Coembedding Sequence and Structure: CLSS Maps the Protein Universe

Longo LM et al., PNAS - This episode summarizes a PNAS study introducing CLSS, a contrastive two-tower protein language model that coembeds domain sequences, structures, and subsequences into a shared...

11 Aug 23min

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

438: Mapping AIRE: a proactive atlas of 9,790 missense variants

Axakova A et al., The American Journal of Human Genetics - Axakova et al. generated a variant effect map for AIRE using an insulin‑promoter GFP reporter in HEK293 cells to measure the functional impac...

10 Aug 24min

437: Cell villages and Dirichlet modeling map human cell fitness genetics

437: Cell villages and Dirichlet modeling map human cell fitness genetics

Hanson C et al., The American Journal of Human Genetics - Hanson et al. combine pooled multi-donor human neural progenitor cell "villages" with Townlet, a hierarchical Dirichlet regression model, to e...

9 Aug 28min

436: KIAP4 and the ARND family: building the Leishmania adhesion plaque

436: KIAP4 and the ARND family: building the Leishmania adhesion plaque

Owino BO et al., PNAS - Using TurboID proximity proteomics and microscopy, researchers identify KIAP4 as the canonical member of a conserved Adhesion Related NTPase-like Domain (ARND) family that loca...

8 Aug 24min

435: E. coli TGT binds two tRNAs — cryo-EM reveals dual engagement

435: E. coli TGT binds two tRNAs — cryo-EM reveals dual engagement

Ember M et al., PNAS - This episode examines a cryo-EM study of Escherichia coli tRNA-guanine transglycosylase (TGT) that solves the enzyme structure and its covalent intermediate with tRNATyr. Unexpe...

7 Aug 19min

Populært innen Vitenskap

fastlegen
tingenes-tilstand
romkapsel
rss-nysgjerrige-norge
liberal-halvtime
rekommandert
jss
villmarksliv
dekodet-2
abels-tarn
sinnsyn
vett-og-vitenskap-med-gaute-einevoll
fjellsportpodden
rss-overskuddsliv
rss-rekommandert
rss-paradigmepodden
tomprat-med-gunnar-tjomlid
diagnose
rss-inn-til-kjernen-med-sunniva-rose
nordnorsk-historie