Base by Base

Base by Base

Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, making open-access science faster to share and easier to explore.

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Episoder(463)

31: Non-canonical FBN1 splicing in the 100k Genomes Project

31: Non-canonical FBN1 splicing in the 100k Genomes Project

Walker S et al., Genetics in Medicine - Genome sequencing of 78,195 participants in the 100,000 Genomes Project identified ultra-rare non-canonical FBN1 splice variants enriched among individuals recr...

5 Jun 202533min

30: Bi‑allelic POPDC2 variants and a recessive cardiac conduction syndrome

30: Bi‑allelic POPDC2 variants and a recessive cardiac conduction syndrome

Nicastro M et al., The American Journal of Human Genetics - Researchers identify bi-allelic POPDC2 variants in multiple families causing sinus-node dysfunction, atrioventricular conduction defects and...

26 Mai 202526min

29: Rethinking Agency: Predictors of Genetic Testing Intention among Latinos

29: Rethinking Agency: Predictors of Genetic Testing Intention among Latinos

Chavez-Yenter D et al., Genetics in Medicine - A cross-sectional SEM study of 503 English-fluent Latino adults applied the Integrated Behavioral Model to identify predictors of intention for carrier s...

23 Mai 202516min

28: scPrediXcan: Deep learning meets single-cell TWAS

28: scPrediXcan: Deep learning meets single-cell TWAS

Zhou Y et al., Cell Genomics - This paper introduces scPrediXcan, which combines a deep-learning model (ctPred) built on Enformer-derived features with single-cell RNA-seq to perform cell-type-specifi...

22 Mai 202525min

27: ENVLPE+: Shuttling VLPs that load functional CRISPR RNPs

27: ENVLPE+: Shuttling VLPs that load functional CRISPR RNPs

Geilenkeuser J et al., Cell - A Cell paper describing ENVLPE/ENVLPE+, virus-like particles engineered with nucleocytosolic-shuttling Gag-PCP to recruit aptamer-tagged (pe)gRNAs and preferentially pack...

21 Mai 202516min

26: Reannotation reveals functional non-coding mutations in melanoma

26: Reannotation reveals functional non-coding mutations in melanoma

Pepe D et al., The American Journal of Human Genetics (112:1–21, June 5, 2025) - Pepe et al. show that annotating cancer mutations to the transcripts actually expressed in tumors uncovers previously o...

20 Mai 202515min

25: mtDNA discovery in Solve‑RD: phenotype‑driven reanalysis

25: mtDNA discovery in Solve‑RD: phenotype‑driven reanalysis

Ratnaike et al et al., The American Journal of Human Genetics - A semi-automated mtDNA reanalysis pipeline using MToolBox and MitoPhen HPO-based phenotype similarity was applied to the Solve-RD cohort...

19 Mai 202516min

24: X chromosome and dosage-compensation in complex traits

24: X chromosome and dosage-compensation in complex traits

Fu Y et al., The American Journal of Human Genetics - Fu et al. (2025) analyze large biobank datasets to quantify how the X chromosome contributes to complex trait heritability and how dosage-compensa...

18 Mai 202514min

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