Base by Base

Base by Base

Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, making open-access science faster to share and easier to explore.

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Episoder(444)

386: Genome Doubling and the Bioeconomy

386: Genome Doubling and the Bioeconomy

Peeters MKR et al., Proceedings of the National Academy of Sciences (PNAS) - A perspective outlining how genome doubling (polyploidy) reshapes genomes, phenotypes, and ecological interactions and how ...

5 Jun 24min

385: Growth under Pressure: Polyploidy Induced by Stress

385: Growth under Pressure: Polyploidy Induced by Stress

Sarabia Olivera L et al., PNAS - A perspective that surveys how diverse stresses trigger whole‑genome doubling (polyploidy) across fungi, plants, and animals, outlines common cell‑cycle mechanisms tha...

4 Jun 24min

384: RNA Brake on Cholera Phage: CisR Controls CTXϕ

384: RNA Brake on Cholera Phage: CisR Controls CTXϕ

Haycocks JRJ et al., PNAS - This episode examines the discovery of CisR, a small RNA produced from the 3’UTR of prtV in Vibrio cholerae, which posttranscriptionally represses the CTXϕ-encoded cep mRNA...

3 Jun 23min

383: Genetics of the Circulating Proteome: pQTLs, Pathways, and Disease Links

383: Genetics of the Circulating Proteome: pQTLs, Pathways, and Disease Links

Koprulu M et al., Cell - A 38-cohort proteogenomic meta-analysis of up to 78,664 people maps fine‑mapped protein quantitative trait loci (pQTLs) across 1,116 circulating proteins, uses machine learnin...

2 Jun 23min

382: How animal blood cells evolved from unicellular ancestors

382: How animal blood cells evolved from unicellular ancestors

Nagahata Y et al., PNAS - A transcriptome-driven reconstruction of blood cell evolution shows modern animal blood lineages arose by repurposing an ancestral unicellular toolkit. The study traces macro...

2 Jun 26min

381: Light-written spatial barcodes enable tunable multiomic sequencing (BALI)

381: Light-written spatial barcodes enable tunable multiomic sequencing (BALI)

Battistoni G et al., PNAS - This paper presents BALI, a light-driven method that writes combinatorial DNA spatial barcodes directly onto biomolecules in tissue by iterative photocleavage and ligation,...

1 Jun 26min

380: Prime-SGE maps drug-resistance variants at scale

380: Prime-SGE maps drug-resistance variants at scale

Abadie FMC et al., Cell Genomics - Abadie et al. present prime‑SGE, a pooled prime‑editing framework that installs thousands of precise point mutations across multiple oncogenes and identifies drug‑re...

29 Mai 11min

379: Long reads reveal hidden structural and repeat variation in autism

379: Long reads reveal hidden structural and repeat variation in autism

Mortazavi M et al., Cell Genomics - PaperCast Base by Base discusses a long-read whole-genome sequencing study of 267 individuals from 63 families that increased detection of structural variants and t...

27 Mai 26min

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