Base by Base

Base by Base

Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, making open-access science faster to share and easier to explore.

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Episoder(444)

434: High‑coverage genomes recast Japan's prehistoric demography

434: High‑coverage genomes recast Japan's prehistoric demography

Ishiya K et al., PNAS - This episode examines a PNAS study that reports two high-coverage ancient human genomes from mainland Japan (an Initial Jomon >67× and a Middle Yayoi >46×). The genomes enable ...

6 Aug 27min

433: Lactate, HSP90α and the Mitochondrial Switch

433: Lactate, HSP90α and the Mitochondrial Switch

Wu G et al., Proceedings of the National Academy of Sciences - This episode examines a PNAS study that identifies site-specific lactylation of HSP90α as a metabolic signal linking glycolysis to mitoch...

23 Jul 23min

432: Echovirus 18: Capsid opening releases the genome

432: Echovirus 18: Capsid opening releases the genome

Mukhamedova L et al., Proceedings of the National Academy of Sciences - Using cryo-electron tomography and single-particle cryo-EM of infected Cos-7 cells, the authors show that echovirus 18 (E18) rel...

23 Jul 18min

431: KIAP4 and the ARND family: essential proteins for Leishmania–sand fly adhesion

431: KIAP4 and the ARND family: essential proteins for Leishmania–sand fly adhesion

Owino BO et al., Proceedings of the National Academy of Sciences - TurboID proximity labeling and proteomics identify KIAP4 as the canonical member of a conserved Adhesion Related NTPase-like Domain (...

23 Jul 21min

430: Proterozoic Rise: Steady Diversification of Crown Eukaryotes

430: Proterozoic Rise: Steady Diversification of Crown Eukaryotes

Sandin MM et al., Proceedings of the National Academy of Sciences - Molecular clocks and diversification models applied to a 75,975-OTU rDNA dataset, including long-read environmental sequences and 77...

23 Jul 25min

429: Validating the EAGL genetic literacy measure

429: Validating the EAGL genetic literacy measure

Barna LS et al., Human Genetics and Genomics Advances - We summarize a psychometric validation of the EAGL measure using US adult online samples. The study produced a validated 17-item EAGL-short that...

23 Jul 23min

428: Genetic regulation of plasma metabolites in people with HIV

428: Genetic regulation of plasma metabolites in people with HIV

Ait Oumelloul M et al., Human Genetics and Genomics Advances - Untargeted plasma metabolomics (1,930 features) in 1,244 participants of the Swiss HIV Cohort Study were paired with genome-wide genotype...

23 Jul 28min

427: When Genes Talk to Gut: Microbiome as Mediator of Metabolic Risk

427: When Genes Talk to Gut: Microbiome as Mediator of Metabolic Risk

Simpson RC et al., Trends in Genetics - This forum reviews evidence that host genetic variants associated with metabolic disease often overlap with loci that shape gut microbiome composition and funct...

23 Jul 25min

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